DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and not

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster


Alignment Length:448 Identity:106/448 - (23%)
Similarity:166/448 - (37%) Gaps:132/448 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VPEVPATPVKFIEDMNEAEAATAMRLP--------AGLTNLGNTCYMNATVQCLNAVPELRTALS 133
            ||.||.|     ::.|...|....||.        .||.|||.||:||..||.|...|.|.   .
  Fly   335 VPWVPTT-----KETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLS---D 391

  Fly   134 TFSNDGTD--TMSTAFSISSAMKSIFAQMEKGTTVTPIVLLQALHRASPQFAQTGENGTYRQQDA 196
            .|.:|..|  :.|:...:...:..:|.:...|:. :|:.|.:.||..   :........|.||||
  Fly   392 YFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSR-SPLSLHRLLHLI---WNHAKHLAGYEQQDA 452

  Fly   197 NECWAEILKMLQQ---KLRPKNQEPSN-------TVQKRHSS---------FIDQFFGGTFEVK- 241
            :|.:...|.:|.:   |.:.:::..||       |.....||         .|||.|.|..:.. 
  Fly   453 HEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDV 517

  Fly   242 -------MSSEEDPDEPSTVTSENFLQLSCFISMDVKYMQSGLKSKMKEQLVK---KSETLGRDA 296
                   :|:..||          |..:|  :.:.......|:..|.....::   ::|.||..|
  Fly   518 VCQACNGVSTTYDP----------FWDIS--LDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAA 570

  Fly   297 KY-----------IRTYLVSRLPAYLTVQFVRFQYKGKEGINAKVLKDIKFPIDFDAFELCTPEL 350
            |.           .:.:.:..||:.::....||::...  |:.|:...|:||::||         
  Fly   571 KIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSAL--IDRKISSFIQFPVEFD--------- 624

  Fly   351 QNKLCPMRSKFKDLEDKKMEVDVVKRNEPNEEKKDVKYEQFWFDDDLGSNNSGYYTLQAVLTHKG 415
               :.|..|                      |||:. |..|.|            :|.||:.|.|
  Fly   625 ---MTPFMS----------------------EKKNA-YGDFRF------------SLYAVVNHVG 651

  Fly   416 RSSSSGHYVAWVRSSGDVWFKFDDDEVSAVATDEILRLSGGGDWHCAYVLLYAPRRLE 473
             :..:|||.|:||...|.|.|.||..::..:..::|...|       |:|.|....||
  Fly   652 -TIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEG-------YLLFYHKNVLE 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521
Peptidase_C19A 105..467 CDD:239122 94/404 (23%)
notNP_001401041.1 zf-UBP 253..310 CDD:460464
Peptidase_C19D 365..696 CDD:239125 94/406 (23%)
Blue background indicates that the domain is not in the aligned region.

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