DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and Usp5

DIOPT Version :9

Sequence 1:NP_001260321.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001246589.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster


Alignment Length:500 Identity:93/500 - (18%)
Similarity:172/500 - (34%) Gaps:185/500 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GLTNLGNTCYMNATVQCLNAVPELRTAL-------------STFSND--------GTDTMSTAFS 148
            |:.||||:||:|:.:|.|..:|:.:...             |..:||        ||...|..:|
  Fly   333 GMRNLGNSCYINSVMQVLFVIPDFQQRFVGTGAERYFKEFPSDPANDFNIQMAKLGTGLQSGKYS 397

  Fly   149 ISSAMKSIFAQMEKGTTVTPIVLLQALHRASPQFAQTGENGTYRQQDANECWAEILKMLQQKLRP 213
             |.|..::  ..:..|.::|.:....:.:..|.|:      |.:|||||:.:..:|.:|.:..| 
  Fly   398 -SIAENTL--DTDHSTGISPAMFKNIVGKNHPDFS------TKQQQDANDFYLHLLTLLDRNSR- 452

  Fly   214 KNQ-EPSNTVQKRHSSFIDQFFGGTFEVKMSSEED-------PDEPSTVTSENFLQLSCFISMD- 269
             || .|::.::......::..  .:.:||.::.|:       |.:.:|    |..::..|.... 
  Fly   453 -NQTNPADALKFLLEDRVECL--ASHKVKYNTREEYSFRLPVPLDKAT----NLDEVREFQERKK 510

  Fly   270 --------------VKY---MQSGLKSKMKEQLVKK--SETLGRDAKYIRTYLVSRLPAYLTVQF 315
                          |::   :|:.|:.....:|:::  |..:|......:...::.:|..|.:..
  Fly   511 AARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYSTAIGSKTNARKITRLATMPDCLMIHV 575

  Fly   316 VRFQ-------------------------------YKGKEGINAKVLKDIKFPIDFDAF-ELCT- 347
            .:|.                               ..|:|.:.....:::||..|.... ||.| 
  Fly   576 GKFTLGDDWVPKKLDVSVDMPDELDLSNWRSAGGLQPGEEALPEPATEEVKFAFDEAVMSELLTM 640

  Fly   348 ---PELQNKLCPMRSKFKDLE-------------------------------------------- 365
               ||...:.| ..:|...||                                            
  Fly   641 GFPPEACKRAC-YHTKNSGLEAASNWLMEHIADEDISEPFVVPNNSIGDCAANQFVANPESLAML 704

  Fly   366 -----DKKMEVDVVKRNEPNEEKKDVKYEQFWF---DDDLG-------SNNS------------- 402
                 |::..|..:|..:.|.|:     ...|.   .|.:|       :|:|             
  Fly   705 MSMGFDERQAVAALKATDGNVER-----ATDWIFSHADSIGVEDAAPAANSSAAAASSTPNKTNY 764

  Fly   403 ----GYYTLQAVLTHKGRSSSSGHYVAWVRSSGDVWFKFDDDEVS 443
                |.|.|.|.::|.|.|:..||||..:|..|: |..|:|.:|:
  Fly   765 RDGRGKYRLVAFISHMGTSAQVGHYVCHIRKKGE-WVIFNDSKVA 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_001260321.1 UBQ 4..73 CDD:214563
UBQ 5..73 CDD:294102
UCH 103..467 CDD:278850 93/499 (19%)
Peptidase_C19A 105..467 CDD:239122 93/499 (19%)
Usp5NP_001246589.1 UBP14 24..825 CDD:227532 93/499 (19%)
zf-UBP 204..278 CDD:280334
Peptidase_C19B 333..823 CDD:239123 93/499 (19%)
UBA1_UBP5_like 631..674 CDD:270480 9/43 (21%)
UBA2_UBP5 696..737 CDD:270569 6/45 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456913
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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