DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp14 and Usp30

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_572274.1 Gene:Usp30 / 31519 FlyBaseID:FBgn0029819 Length:558 Species:Drosophila melanogaster


Alignment Length:558 Identity:108/558 - (19%)
Similarity:174/558 - (31%) Gaps:243/558 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 AGLTNLGNTCYMNATVQCLNAVPELRTALSTFSNDGTDTMSTAFSISSAMKSI---FAQMEKGTT 165
            |||.|.|.||::|..:|.:.|.|:....|..::|...|..|...|:.:.::.:   .|.: :|..
  Fly    39 AGLHNFGLTCFLNTLLQAMAACPQFIAWLQLYNNASPDRKSLITSMLNTLEVVNGTHATL-RGDP 102

  Fly   166 VTPIVLLQALHRAS---PQFAQTGENGTYRQQDANECWAEILKMLQQK-LRPK------------ 214
            .:|..:|:||:...   ||          .:.||:|.:..:|..|::: :||:            
  Fly   103 YSPGAVLRALNALGWVIPQ----------EEHDAHELFHVLLTCLEEEAIRPQPLGCLSDALPTD 157

  Fly   215 NQEPSN-----TVQKRHSSFIDQFFGGTFEVKMSSEEDPDEPSTVTSENFLQLSCFISMDVKYMQ 274
            |.:.|:     |......||.....|  ........:.|:.||:.      .|:.|::|:..   
  Fly   158 NDDNSSLAGTATPVGGFRSFSSMAAG--LGASQRIGDQPNRPSSA------MLTDFLNMEYD--- 211

  Fly   275 SGLKSKMKEQLVKK----------------SETLGR---DAKYIRT----YLVS----------- 305
               :|...::||:.                ::.||.   ||....|    .|||           
  Fly   212 ---ESTSLQRLVRSEAHTPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLATPMLG 273

  Fly   306 -------RLPAYLTVQFVRFQYKGKEGINAKVLKDI----------------------------- 334
                   |||        :.|.:..||:|.:|....                             
  Fly   274 GERSSRPRLP--------QSQQQQDEGLNRRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHPFQ 330

  Fly   335 --------------KFPIDFDAFELCTPELQNKLCPMR----------SKF---KDLEDKKMEVD 372
                          |..:.:|.|:..|..|.    |.|          |::   :||.|.|.:  
  Fly   331 GAMGAQIVCNGCGSKSAVRYDKFDSITLNLP----PQRRTGLSLGHLLSEYITSEDLSDVKCD-- 389

  Fly   373 VVKRNEPNEEKKDVKYEQF------------W--------------FDDDL-------------- 397
              ..||.....|.|.:.:.            |              |.:.|              
  Fly   390 --SCNETTTHTKSVTFAKLPACLCIHVARTVWLPTGQVCKRKDYVHFPESLSMAPYSFVQPHLNS 452

  Fly   398 ------GSNNSGY------------------------YTLQAVLTHKGRSSSSGHYVAWVRSS-- 430
                  ||..|.|                        |.|.||:.|.| .::|||:|.:.|.|  
  Fly   453 QAGTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNLYRLLAVVVHSG-EANSGHFVTYRRGSLR 516

  Fly   431 -GDVWFKFDDDEVSAVATDEILRLSGGGDWHCAYVLLY 467
             ...|:...|..|..|:.||:|.:.       ||:|.|
  Fly   517 NAHRWYYTSDTIVREVSIDEVLSVP-------AYLLFY 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521
Peptidase_C19A 105..467 CDD:239122 106/555 (19%)
Usp30NP_572274.1 Peptidase_C19 39..>139 CDD:470612 29/110 (26%)
Peptidase_C19F <323..548 CDD:239127 46/241 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.