DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and Usp16-45

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster


Alignment Length:355 Identity:81/355 - (22%)
Similarity:137/355 - (38%) Gaps:98/355 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 RLP--AGLTNLGNTCYMNATVQCLNAVPELRTALSTFSNDGTD---------------------- 141
            |||  .|||||||||:.||.:|||...|.|.:.|...|..|.:                      
  Fly   301 RLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIK 365

  Fly   142 -TMSTAFSISSAMKSIFAQMEKGTTV-TPIVLLQALHRASPQFAQTGENGTYRQQDANECWAEIL 204
             |:|:...:::|:.:...:::.|.:| ||..|...|....|||  ||.:    |.||:|...::|
  Fly   366 GTLSSWGGLTAALANALEELQAGGSVFTPRKLFDRLCVKCPQF--TGGD----QHDAHELLRQLL 424

  Fly   205 ------------KMLQQKLRPKNQEPSNTVQK-RHSSFI------------DQFFGGTFEVKMSS 244
                        :::.|.|..|:|:.::..:: |....|            :|.|.| |.|...:
  Fly   425 ESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRG-FLVSTLT 488

  Fly   245 EEDPDEPSTVTSENFLQLSCFISMDVKYMQSGLKSKMKEQLVKKSETLGRDAKYIRTYLVSRLPA 309
            .:|....|: ..|.||.:|..::::........|...:..|...|.::              .|:
  Fly   489 CQDCHNVSS-RHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSV--------------TPS 538

  Fly   310 YLTVQFVRFQYKGKEGINAKVLK-DIKFPIDFDAFELCTPELQNKLCPMRSKFKDLEDKKMEVDV 373
                       .|:..||.|... .:.|.....:|.|...|..: |.|.:|:.|..::::.:   
  Fly   539 -----------TGQPTINTKFTDGSVNFTASSPSFFLHAHEAAS-LGPSKSQVKKEKERQRK--- 588

  Fly   374 VKRNEPNEEKKDVKYEQFWFDDDLGSNNSG 403
            .||.....:|..:         :|..|:||
  Fly   589 AKRAAKKRQKSSL---------NLNGNDSG 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521
Peptidase_C19A 105..467 CDD:239122 78/349 (22%)
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464
UBP12 <307..990 CDD:227847 78/349 (22%)
Peptidase_C19 307..>512 CDD:470612 55/212 (26%)
Peptidase_C19K <849..1123 CDD:239132
Blue background indicates that the domain is not in the aligned region.

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