DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and F59E12.6

DIOPT Version :9

Sequence 1:NP_001260321.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001379688.1 Gene:F59E12.6 / 173951 WormBaseID:WBGene00019122 Length:499 Species:Caenorhabditis elegans


Alignment Length:468 Identity:90/468 - (19%)
Similarity:168/468 - (35%) Gaps:151/468 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QPDRQKVMCKGGILKDDQWNLQIKDGAVVLLLGSKESVPEVPATPVKFIEDMNEAEAATAMRLPA 104
            ||.|::.:.       |..|::..:.||::       .|.|..:|        |::.........
 Worm    38 QPTRRQFLL-------DMLNVKWNERAVIV-------SPSVSMSP--------ESDTLAQSESSV 80

  Fly   105 GLTNLGNTCYMNATVQCLNAVPELRTALSTFSNDGTDTMSTA--------------FSISSAMKS 155
            |:.|..::|:::..||.|..||:|.:.|..|::  .:.::.|              ::|....:.
 Worm    81 GIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTS--MEYLNYALQYNKKNLKHAELLYTIVGTFRE 143

  Fly   156 IFAQMEKGTTVTPIVLLQALHR--ASPQFAQTGENGTYRQQDANECWAEILKMLQQKLRPK---- 214
            :.:.......:..|.|||.|.:  |||...        .|||..|.:..|.:.|:..:...    
 Worm   144 LKSARSTSRPIEVIALLQVLEKMSASPIID--------HQQDVCELFTTISQWLEIAIDDAMDYH 200

  Fly   215 -NQEPSNTVQKR-----HSSFIDQFF---------GGTFEVKMSSEEDPDEPSTVTSENFLQLSC 264
             |.|.:::.::|     .....|:.|         |.|...::.:       ...:.|:|.:...
 Worm   201 VNHENNHSEEERQLYINQKKMFDRIFPSFRHNDSLGVTVNAQVGN-------FRASVEHFFEHFT 258

  Fly   265 FISMDVKYMQSGLKSKMKEQLVKKSETLGRDAKYIRTYLVSRLPAYLTVQFVRFQYKGKEGINAK 329
            ..|:|:.::|.   .:..|...|.:|.:                                     
 Worm   259 SNSVDMVFVQF---DRAMEDRTKSNERM------------------------------------- 283

  Fly   330 VLKDIKFPIDFDAFELCTPELQNKLCPMRSKFKDLEDKKMEVDVVKRNEPNEEKKDVKYEQFWFD 394
                 :||   .:|:...|::.|:....:| |:....||..      .:||              
 Worm   284 -----EFP---KSFQPKFPKVSNQKVSNQS-FQKFRTKKFP------TQPN-------------- 319

  Fly   395 DDLGSNNSGYYTLQAVLTHKGRSSSSGHYVAWV-RSSGDVWFKFDDDEVSAVATDEILRLS---G 455
                :|:|.||.|..::.|.|.|:..||:.::| ::....|.|||||.||.|..:::...|   |
 Worm   320 ----ANSSCYYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNVRWEDVAAQSFGTG 380

  Fly   456 GGDWHCAYVLLYA 468
            ......|.:|:||
 Worm   381 SSKTASACLLVYA 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_001260321.1 UBQ 4..73 CDD:214563 7/32 (22%)
UBQ 5..73 CDD:294102 7/32 (22%)
UCH 103..467 CDD:278850 77/402 (19%)
Peptidase_C19A 105..467 CDD:239122 77/400 (19%)
F59E12.6NP_001379688.1 UCH 80..392 CDD:395355 77/401 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43982
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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