DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5alpha and si:dkeyp-92c9.2

DIOPT Version :9

Sequence 1:NP_001260320.1 Gene:Cdk5alpha / 34385 FlyBaseID:FBgn0027491 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_001038685.1 Gene:si:dkeyp-92c9.2 / 571482 ZFINID:ZDB-GENE-060503-468 Length:317 Species:Danio rerio


Alignment Length:473 Identity:161/473 - (34%)
Similarity:197/473 - (41%) Gaps:183/473 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGTVLSFNPRDRHPIYSSQPNFQYNHSTDMRNENDSTGSIDSHLNNFSYEQLNNAKNRENKKSAC 65
            ||||||.:|..|.|.|                .:|..||: ||..:.|...||..|:|..|:.  
Zfish     1 MGTVLSLSPGPRKPGY----------------YDDRPGSL-SHYPSLSSRSLNTQKDRSLKRG-- 46

  Fly    66 HPMAKNVIGQPGGQCGGVHINLQTQTQLSSHNLNNLANASKDTITNVLDTHNENSVLKAEKSSFE 130
                                                                             
Zfish    47 ----------------------------------------------------------------- 46

  Fly   131 KNLKKHSIFINALSWKKLSTSHNKKKIENKNKCANLPTACFKAQLLESSFASSSDKNRNIQLHCN 195
                 ||||:.||:||:|..| .||:.|:|           ||.........:...|.||.    
Zfish    47 -----HSIFLPALTWKRLVAS-TKKRGESK-----------KAYPGGQGAVGAPLNNNNIY---- 90

  Fly   196 RIDEHNQQHCNQHPHPHPHQHQLQLQNQHQHQNQNQNQNQNQVQDIREEVMTGPPGKSQNPSKAK 260
                                                                           .|
Zfish    91 ---------------------------------------------------------------QK 92

  Fly   261 DPV----KVNNKNSMSNHNKLIQKQPLTL---------SLPQQVQASSIQTKNTNQIPRKTVIQA 312
            ||:    :.|.|.|:|..|......|..:         .|||......|....|:. |::.::||
Zfish    93 DPILHLNRENVKKSLSCANLSSYDGPAGVGLGVGLGYGKLPQISSVKKIAPTCTSS-PKRVIVQA 156

  Fly   313 STSELLKCLGMFLHCRCQRLNNFDAGDAVMWLRAVDRSLLLQGWQDVAFINPANVVFVYMLVREL 377
            ||||||:|||.||..||.||.:....|.|:||||||||||||||||.||:.||||||||||.|::
Zfish   157 STSELLRCLGEFLCTRCYRLKHLSPADPVLWLRAVDRSLLLQGWQDQAFVTPANVVFVYMLCRDV 221

  Fly   378 VSGEE-SKESDLQASVLTCLYLSYSYMGNEISYPLKPFLVEDSKEKFWDRCLVIVNKLSDKMLKI 441
            |.|:. |.|.:|||.:|||||||||||||||||||||||||..||.||||||.|::..|.|||:|
Zfish   222 VDGDSVSSEHELQAILLTCLYLSYSYMGNEISYPLKPFLVEAGKEAFWDRCLAIIDVTSAKMLRI 286

  Fly   442 NAEPGFFTEVFTELKSCG 459
            ||:|.|||:||.:|||.|
Zfish   287 NADPHFFTQVFADLKSEG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5alphaNP_001260320.1 CDK5_activator 107..458 CDD:281279 138/364 (38%)
si:dkeyp-92c9.2NP_001038685.1 CDK5_activator 40..302 CDD:281279 139/413 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593203
Domainoid 1 1.000 222 1.000 Domainoid score I2518
eggNOG 1 0.900 - - E1_KOG3932
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 252 1.000 Inparanoid score I3192
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1492547at2759
OrthoFinder 1 1.000 - - FOG0001633
OrthoInspector 1 1.000 - - otm25117
orthoMCL 1 0.900 - - OOG6_107211
Panther 1 1.100 - - O PTHR23401
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3652
SonicParanoid 1 1.000 - - X1362
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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