back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG5390 and tmprss4

DIOPT Version :9

Sequence 1:	NP_001285802.1	Gene:	CG5390 / 34383	FlyBaseID:	FBgn0032213	Length:	406	Species:	Drosophila melanogaster
Sequence 2:	XP_012822151.1	Gene:	tmprss4 / 733869	XenbaseID:	XB-GENE-940762	Length:	785	Species:	Xenopus tropicalis

Alignment Length:	266	Identity:	74/266 - (27%)
Similarity:	115/266 - (43%)	Gaps:	39/266 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   142 GVGFK---ITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSI 203
            |.|.|   |.|..|  ::..::||.:::    ..:..:.|||:::....:|.||||....|.
Frog   544 GTGHKQERIIGGSN--SDILKYPWQVSL----QYMGQHICGGSILNSRWILCAAHCFDRGQR--- 599

  Fly   204 VVRAGEWDTQTQ-TEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNV 267
              :...|..|.. |.:......:|.:|..:.::......||:|::.|:|......::|.||||.
Frog   600 --QVDRWRVQYGITTLTYLFGTFVDKIFLNSKYVTDQKPNDIALLQLKSDIVASASVQPVCLPG- 661

  Fly   268 GDKFDFDR-------CYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILH 325
                 :|.       .|.||||....| .......|::|.:.::....|     ....|...:
Frog   662 -----YDNNLVVGAVLYVTGWGHTVEG-GAALASQLQEVAISLISSTTC-----NQEYGGQIL-- 713

  Fly   326 DSFICAGG-EKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPW 389
            |:.:|||. ....|||:||.|.|||.  .||.:.::..|||:||.|||..|..|||..|.....|
Frog   714 DTMLCAGKIAGGADTCQGDSGGPLVS--LGQSSHWEQVGIVSWGDGCGRPNRVGVYTDVQSFLNW 776

  Fly   390 IDAKLK 395
            |...:|
Frog   777 IYGVMK 782

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.