DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and LOC595077

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_031748571.1 Gene:LOC595077 / 595077 -ID:- Length:752 Species:Xenopus tropicalis


Alignment Length:257 Identity:87/257 - (33%)
Similarity:128/257 - (49%) Gaps:24/257 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 VGFKITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRA 207
            |..:|.|..|...  ||:||.:::..:...:    |||:||..:.|||||||..:::.|..:|..
 Frog   427 VSDRIVGGTNSMK--GEWPWQISLSYKGQTV----CGGSLITDSWVLTAAHCFDSQKVSQYIVYL 485

  Fly   208 GEWDTQTQTEIRRHEDRY---VKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGD 269
            |.:    |....::.:..   ||.||.::.:.......|:|::.||.|.|....|..||||....
 Frog   486 GVY----QLSNLKNPNTVSSGVKRIIINKAYQYEGSSGDIALIELEKPVTFTPYILPVCLPPPAS 546

  Fly   270 KFDF-DRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRH----FILHDSFI 329
            :... .:|:.||||..|.|:|......|:|..:.::....||. :.||..|..    ||:.|.| 
 Frog   547 ELPAGTKCWVTGWGDIKEGQDLSNPKTLQKASVKLIDWNSCEP-MYETTFGYKPSVPFIMDDMF- 609

  Fly   330 CAGGEKDK-DTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
            |||.::.: |.|:||.|.||||.:   .|.:...||::|||||.|.|.||||..|.....||
 Frog   610 CAGYKEGQIDACQGDSGGPLVCNV---NNTWWQYGIISWGIGCAEANAPGVYTKVQYYDSWI 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 83/247 (34%)
Tryp_SPc 153..390 CDD:214473 81/245 (33%)
LOC595077XP_031748571.1 Tryp_SPc 35..272 CDD:238113
Tryp_SPc 431..670 CDD:238113 86/253 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.