DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and alphaTry

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster


Alignment Length:257 Identity:74/257 - (28%)
Similarity:119/257 - (46%) Gaps:33/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PNGVGFKITGAV--NQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSS 202
            |.|:..::.|.:  ........|||.:::.|.    ..:.|||::.:.|:::|||||:.:...|.
  Fly    20 PEGLLPQLDGRIVGGSATTISSFPWQISLQRS----GSHSCGGSIYSANIIVTAAHCLQSVSASV 80

  Fly   203 IVVRAGEWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCL--- 264
            :.||||.....:...:.:     |.....||.:|..::.||:||:.|.|..:...:|:.:.|   
  Fly    81 LQVRAGSTYWSSGGVVAK-----VSSFKNHEGYNANTMVNDIAVIRLSSSLSFSSSIKAISLATY 140

  Fly   265 -PNVGDKFDFDRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSF 328
             |..|..     ...:|||....| .......|:.|::.:|.:.||.:    :..|....:.::.
  Fly   141 NPANGAS-----AAVSGWGTQSSG-SSSIPSQLQYVNVNIVSQSQCAS----STYGYGSQIRNTM 195

  Fly   329 ICAGGEKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
            |||.. ..||.|:||.|.|||       :.....|:|:||.||...|.|||||.||.||.|:
  Fly   196 ICAAA-SGKDACQGDSGGPLV-------SGGVLVGVVSWGYGCAYSNYPGVYADVAVLRSWV 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 71/242 (29%)
Tryp_SPc 153..390 CDD:214473 70/240 (29%)
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 70/245 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.