DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and LPA

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:411 Identity:104/411 - (25%)
Similarity:168/411 - (40%) Gaps:79/411 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CGAQDSSLDKLISDIFKTDETPKPSSPPPPVVN------PKDSSGSTGSENG--GSSSTQYQSCG 72
            |...|.|:.....::.:..:|......||.|:.      |.:.....|:..|  |..:|......
Human  1676 CFTMDPSIRWEYCNLTRCSDTEGTVVAPPTVIQVPSLGPPSEQDCMFGNGKGYRGKKATTVTGTP 1740

  Fly    73 DQK----------ECVP---RWLCANDTINTSGDGIIDIRLGTDAECKNYLDLCCDLPNKRKDPI 124
            .|:          ..:|   :|.........:.||.|:.........:...|. ||:|.......
Human  1741 CQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDY-CDIPLCASSSF 1804

  Fly   125 FEFKPD-HPEGCGYQNPNGVGFKITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVV 188
            ...||. .|:.|    |..:   :.|.|   |....:||.:::....|.   :.|||.||:|..|
Human  1805 DCGKPQVEPKKC----PGSI---VGGCV---AHPHSWPWQVSLRTRFGK---HFCGGTLISPEWV 1856

  Fly   189 LTAAHCV-HNKQPSSIVVRAGEWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESP 252
            ||||||: .:.:|||..|..|   ...:..:..|    |:||.....|.:.: ..|:|::.|..|
Human  1857 LTAAHCLKKSSRPSSYKVILG---AHQEVNLESH----VQEIEVSRLFLEPT-QADIALLKLSRP 1913

  Fly   253 FTLQENIQTVCLPNVGDKFDF-----DRCYATGWGKNK--FGKDGEYQVILKKVDMPVVPEQQCE 310
            ..:.:.:...|||:.    |:     ..||.||||:.:  ||..     :||:..:.|:..:.|.
Human  1914 AVITDKVMPACLPSP----DYMVTARTECYITGWGETQGTFGTG-----LLKEAQLLVIENEVCN 1969

  Fly   311 TNLRETRLGRHFILHDSFICAGG-EKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEV 374
                          |..:|||.. .:..|:|:||.|.||||   .:|:::...|:.:||:||...
Human  1970 --------------HYKYICAEHLARGTDSCQGDSGGPLVC---FEKDKYILQGVTSWGLGCARP 2017

  Fly   375 NIPGVYASVAKLRPWIDAKLK 395
            |.|||||.|::...||:..::
Human  2018 NKPGVYARVSRFVTWIEGMMR 2038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 74/246 (30%)
Tryp_SPc 153..390 CDD:214473 73/245 (30%)
LPANP_005568.2 Kringle 28..105 CDD:278480
Kringle 142..219 CDD:278480
Kringle 256..333 CDD:278480
Kringle 370..447 CDD:278480
Kringle 484..561 CDD:278480
Kringle 598..675 CDD:278480
Kringle 712..789 CDD:278480
Kringle 826..903 CDD:278480
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:278480
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
KR 1386..1466 CDD:214527
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527 3/18 (17%)
Kringle 1720..1799 CDD:278480 14/79 (18%)
Tryp_SPc 1820..2034 CDD:238113 76/256 (30%)
Tryp_SPc 1820..2033 CDD:214473 75/255 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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