DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and CLIPC1

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_552698.3 Gene:CLIPC1 / 3291827 VectorBaseID:AGAP008835 Length:389 Species:Anopheles gambiae


Alignment Length:358 Identity:100/358 - (27%)
Similarity:149/358 - (41%) Gaps:53/358 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 CGDQKECVPRWLCANDTINTSGD----GIID-------IRLGTDA------------ECKNYLDL 112
            |....||.|   ..:|..|..|:    |.||       .::||..            |.:...:.
Mosquito    44 CRIVSECAP---VIDDIRNRRGNPTKCGFIDRVQIVCCPQVGTTPAAATTPSTTPRNEHQRVAEK 105

  Fly   113 CCDLPNK--RKDPIFEFKPDHP-----EGCGYQNPNGVGFKITGAVNQEAEFGEFPWMLAILREE 170
            |.:....  .|:.:.......|     :.||:   ..|...:.|.:   |:..|||.|..|...|
Mosquito   106 CAEYGQAVFSKEYVNSLTASEPKLQTIDKCGH---TAVELIVDGEL---AKAREFPHMALIGFGE 164

  Fly   171 GNLNLYECGGALIAPNVVLTAAHCV--HNKQPSSIVVRAGEWDTQTQTEIRRHEDRYVKEIIYHE 233
            .....|.|||:|::...:|||.||:  .|..|::| ||.||....:.|:....||..:.|.|.|.
Mosquito   165 APEIRYLCGGSLVSDRFILTAGHCLTSTNFGPATI-VRLGELSLASSTDEAFPEDYDIAERIPHP 228

  Fly   234 QFNKGSLYNDVAVMLLESPFTLQENIQTVCLP---NVGDKFDFDRCYATGWGKNKFGKDGEYQVI 295
            ::.:.|.|||:|::.|..........:.:|||   .:..|    |..|||||...||.  |....
Mosquito   229 EYKQTSHYNDIALIKLNRKVIFSPYARPICLPLQAAIPQK----RAIATGWGAIGFGL--EQSSA 287

  Fly   296 LKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGGEKD-KDTCKGDGGSPL-VCPIAGQKNR 358
            |.||.:.:...::|:.....||..|..:...:.:|||.... ||||:||.|.|| |...|.....
Mosquito   288 LLKVTLDMFRFEECKDQFEPTRKLRTGLNATTQLCAGSRNSTKDTCQGDSGGPLQVYNDANVYCT 352

  Fly   359 FKSAGIVAWGIGCGEVNIPGVYASVAKLRPWID 391
            :...|:.::|..||...:|.||.:|.....||:
Mosquito   353 YTIIGVTSFGQNCGLAGVPAVYTTVYSYLSWIE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 79/244 (32%)
Tryp_SPc 153..390 CDD:214473 78/243 (32%)
CLIPC1XP_552698.3 CLIP 39..79 CDD:197829 10/37 (27%)
Tryp_SPc 143..386 CDD:238113 81/253 (32%)
Tryp_SPc 143..384 CDD:214473 79/250 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
TreeFam 00.000 Not matched by this tool.
21.910

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