DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and CLIPB3

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_307750.3 Gene:CLIPB3 / 3290783 VectorBaseID:AGAP003249 Length:365 Species:Anopheles gambiae


Alignment Length:343 Identity:93/343 - (27%)
Similarity:156/343 - (45%) Gaps:60/343 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KECVPRWLCANDTINTSGDGIIDIRLGTDAEC---KNYLDLCCDLPNKRKDPIFEFKPDHPEGCG 136
            :||.|.....|..|||..|.:    |.|.:.|   :....:||.:.::.:..:.|     |..||
Mosquito    51 RECQPLITIYNKPINTHDDTL----LLTQSRCGMLQRKTLVCCPVTSQARSSLPE-----PPVCG 106

  Fly   137 YQNPNGVGFKITGAVNQEAEFGEFPW--MLAILREEGNLNLYECGGALIAPNVVLTAAHC----- 194
            ..    :..::.|  .|..:..||||  ::...:.:|:.. :.|||:||....::|||||     
Mosquito   107 IH----LADRVIG--GQPTQIDEFPWTALIEFQKPDGSFG-FHCGGSLINDRYIVTAAHCIKSIP 164

  Fly   195 ----VHNKQPSSIVVRAGEWDTQTQTEIRRH------EDRYVKEIIYHEQFN--KGSLYNDVAVM 247
                ||.       ||.||||..:..:.:..      .|..:::|:.|..::  ..|..||:|::
Mosquito   165 RGWKVHR-------VRLGEWDLTSANDCQNEFCSDAPIDLDIEQIVVHTGYDTKDQSNANDIALI 222

  Fly   248 LLESPFTLQENIQTVCLPNVGDKFDFDR----CYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQ 308
            ....|....:.::.:|||......:.:.    .||.||||.:.....|.::   ||:|.:...|:
Mosquito   223 RFTRPVNYSQTVRPICLPLSSSLRNRNHAGMPAYAAGWGKTESATASEKKL---KVEMNIKSLQE 284

  Fly   309 CETNLRETRLGRHFILHDSFICAGGEKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWG-IGCG 372
            |....:...:    :|..:.:||||.:.||||.||.|.||:..::|.   :...|:|::| ..||
Mosquito   285 CAPVYQRGGI----LLKKTHMCAGGVRGKDTCSGDSGGPLMRQMSGS---WYLIGVVSFGPQKCG 342

  Fly   373 EVNIPGVYASVAKLRPWI 390
            ...:||||.:||:...||
Mosquito   343 APGVPGVYTNVAEYVDWI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 75/262 (29%)
Tryp_SPc 153..390 CDD:214473 73/260 (28%)
CLIPB3XP_307750.3 CLIP 37..89 CDD:288855 11/41 (27%)
Tryp_SPc 112..360 CDD:214473 74/267 (28%)
Tryp_SPc 113..363 CDD:238113 76/268 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.