DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and tmprss4b

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:254 Identity:77/254 - (30%)
Similarity:121/254 - (47%) Gaps:39/254 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCV--HNKQPSSIVVRAG 208
            :|.|.|  |.....:||.:::.....::    |||:|::.:.:::||||.  ..::.|...|..|
Zfish   201 RIVGGV--ETSIEHWPWQVSLQFNHRHM----CGGSLLSTSWIISAAHCFTGRTQELSRWTVVLG 259

  Fly   209 EWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLP--NVGDKF 271
                  ||::.......|..|:.|:.:|:.:...|:|::.|..|....|:|..||||  .:..| 
Zfish   260 ------QTKVMDVVGVSVDMIVIHKDYNRLTNDFDIAMLKLTWPVKTGESILPVCLPPHQLAIK- 317

  Fly   272 DFDRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDS----FICAG 332
              |....||||..|.|  |....:|:|..:|:|...:|         .:..|...|    .:|||
Zfish   318 --DMLVVTGWGLLKEG--GALPTVLQKASVPLVNRSEC---------SKPTIYSSSITPRMLCAG 369

  Fly   333 G-EKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
            . :.:.|.|:||.|.|||.    ..:|::..|||:||:||.....|||||.|.:|..||
Zfish   370 FLQGNVDACQGDSGGPLVY----LSSRWQLIGIVSWGVGCAREGKPGVYADVTQLLDWI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 74/247 (30%)
Tryp_SPc 153..390 CDD:214473 72/245 (29%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133
SRCR 105..>175 CDD:278931
Tryp_SPc 201..424 CDD:214473 75/252 (30%)
Tryp_SPc 202..427 CDD:238113 77/253 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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