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Protein Alignment CG5390 and Tmprss6

DIOPT Version :9

Sequence 1:	NP_001285802.1	Gene:	CG5390 / 34383	FlyBaseID:	FBgn0032213	Length:	406	Species:	Drosophila melanogaster
Sequence 2:	XP_006242057.1	Gene:	Tmprss6 / 315388	RGDID:	1307138	Length:	811	Species:	Rattus norvegicus

Alignment Length:	412	Identity:	120/412 - (29%)
Similarity:	166/412 - (40%)	Gaps:	111/412 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 NCLVICLCIFSCGAQDSSLDKLISDIFKTDETPKPSSPPPPVVNPKDSSGSTGSENGGSSSTQYQ 69
            ||  :|..:|.| .:||:...|          |:.....|..:|             ||...|.|
  Rat   488 NC--VCRAMFQC-QEDSTCISL----------PRVCDRQPDCLN-------------GSDEEQCQ 526

  Fly    70 S---CG------DQKECVPRWLCANDTINTSGDGIIDIRLGTDAECKNYLDLCCDLPNKRKDPIF 125
            .   ||      :.:.||.:       .|...||..|.|.|:|.|       .||
  Rat   527 EGVPCGTFTFQCEDRSCVKK-------PNPECDGQADCRDGSDEE-------HCD---------- 567

  Fly   126 EFKPDHPEGCGYQNPNG--VGFKITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVV 188
                     ||.|.|:.  ||    ||::.|   ||:||. |.|:..|.   :.|||||||...|
  Rat   568 ---------CGLQGPSSRIVG----GAMSSE---GEWPWQ-ASLQIRGR---HICGGALIADRWV 612

  Fly   189 LTAAHCVHN---KQPSSIVVRAGE------WDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDV 244
            :|||||...   ..|....|..|:      |..:...::.|        :..|....:.|...||
  Rat   613 ITAAHCFQEDSMASPRLWTVFLGKMRQNSRWPGEVSFKVSR--------LFLHPYHEEDSHDYDV 669

  Fly   245 AVMLLESPFTLQENIQTVCLPNVGDKFD-FDRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQ 308
            |::.|:.|......::.||||.....|: ...|:.||||..:.|..|  ...|:|||:.::|:..
  Rat   670 ALLQLDHPVVYSATVRPVCLPARSHFFEPGQHCWITGWGAQREGGPG--SSTLQKVDVQLIPQDL 732

  Fly   309 CETNLRETRLGRHFILHDSFICAGGEK-DKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCG 372
            |....|       :.:....:|||..| .||.|:||.|.||||  .....|:..||:|:||:|||
  Rat   733 CNEAYR-------YQVTPRMLCAGYRKGKKDACQGDSGGPLVC--KEPSGRWFLAGLVSWGLGCG 788

  Fly   373 EVNIPGVYASVAKLRPWIDAKL 394
            ..|..|||..|.::..||...|
  Rat   789 RPNFFGVYTRVTRVVNWIQQVL 810

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.