DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and Prss30

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_011244785.1 Gene:Prss30 / 30943 MGIID:1353645 Length:347 Species:Mus musculus


Alignment Length:371 Identity:102/371 - (27%)
Similarity:152/371 - (40%) Gaps:88/371 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PPPVVNPKDSSGS----TGSENGGSSSTQYQSCGDQKECVPRWLCANDTINTSGDGII------- 96
            ||.|.:||..|.|    ..||.....||.:          |:|:....|:..|..|..       
Mouse     4 PPVVTSPKSYSQSQLQWLLSEGWALGSTPH----------PQWIVDGLTLRRSYAGFFYNGWARG 58

  Fly    97 DIRLGTDAECKNYLDLCCDLPNKRKDPIFEFKPDHPEGCGYQNPNGVGFKITGAVNQEAEFGEFP 161
            ||.                                |..||:....|   ||.|  .|:|..|::|
Mouse    59 DIL--------------------------------PSVCGHSRDAG---KIVG--GQDALEGQWP 86

  Fly   162 WMLAI-LREEGNLNLYECGGALIAPNVVLTAAHCVHNK-QPSSIVVRAGEWDTQTQTEIRRHEDR 224
            |.::: :.|:|::    |||:||....|||||||.... .||...|:.|   ..|.:.:..|...
Mouse    87 WQVSLWITEDGHI----CGGSLIHEVWVLTAAHCFRRSLNPSFYHVKVG---GLTLSLLEPHSTL 144

  Fly   225 Y-VKEIIYHEQF-----NKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFDFDR-CYATGWG 282
            . |:.|..|..:     :.|    |:|::.|::|.. ......||||.......... |:.||||
Mouse   145 VAVRNIFVHPTYLWADASSG----DIALVQLDTPLR-PSQFTPVCLPAAQTPLTPGTVCWVTGWG 204

  Fly   283 KNKFGKDGEYQVILKKVDMPVVPEQQCET--NLRETRLGRHFILHDSFICAG-GEKDKDTCKGDG 344
            ..   ::.:...:|:::.:|::..:.||.  :.:.:.|....|:....:||| .|..||:|:||.
Mouse   205 AT---QERDMASVLQELAVPLLDSEDCEKMYHTQGSSLSGERIIQSDMLCAGYVEGQKDSCQGDS 266

  Fly   345 GSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
            |.||||.|   .:.:...||.:|||||.....||||..|.....||
Mouse   267 GGPLVCSI---NSSWTQVGITSWGIGCARPYRPGVYTRVPTYVDWI 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 77/250 (31%)
Tryp_SPc 153..390 CDD:214473 75/248 (30%)
Prss30XP_011244785.1 Tryp_SPc 74..312 CDD:238113 79/256 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8716
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.