DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and Tpsb2

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:252 Identity:81/252 - (32%)
Similarity:124/252 - (49%) Gaps:33/252 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 QEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCV--HNKQPSSIVVRAGEWDTQTQ 215
            :||...::||.:: ||.:.:..::.|||:||.|..||||||||  |.|.|....|       |.:
  Rat    34 REASESKWPWQVS-LRFKFSFWMHFCGGSLIHPQWVLTAAHCVGLHIKSPELFRV-------QLR 90

  Fly   216 TEIRRHEDRY--VKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKF-DFDRCY 277
            .:...:.|:.  |...:.|..:.......|:|::.||:|..:..:|....||...:.| ....|:
  Rat    91 EQYLYYADQLLTVNRTVVHPHYYTVEDGADIALLELENPVNVSTHIHPTSLPPASETFPSGTSCW 155

  Fly   278 ATGWGKNKFGKDGEYQVI----LKKVDMPVVPEQQCETNLRETRLGRHF-----ILHDSFICAGG 333
            .||||    ..|.:..::    ||:|.:|:|....|:   |:...|.:.     |:.|..:|||.
  Rat   156 VTGWG----DIDSDEPLLPPYPLKQVKVPIVENSLCD---RKYHTGLYTGDDVPIVQDGMLCAGN 213

  Fly   334 EKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
            .: .|:|:||.|.||||.:   |..:..||:|:||.||.|.|.||:|..|.....||
  Rat   214 TR-SDSCQGDSGGPLVCKV---KGTWLQAGVVSWGEGCAEANRPGIYTRVTYYLDWI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 81/252 (32%)
Tryp_SPc 153..390 CDD:214473 79/250 (32%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 81/252 (32%)
Tryp_SPc 30..266 CDD:214473 79/250 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346323
Domainoid 1 1.000 162 1.000 Domainoid score I3893
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I4145
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.890

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