DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and F2

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_075213.2 Gene:F2 / 29251 RGDID:61996 Length:617 Species:Rattus norvegicus


Alignment Length:340 Identity:98/340 - (28%)
Similarity:149/340 - (43%) Gaps:68/340 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NTSGDGIIDIRLGTDAECKNYLD--------LCCDLPNKRKDPIFEFK--PDHPEGCGYQNPNGV 143
            |..||..|..|. ||||...:.|        ..|.|     .|:||.|  .|..|      ...:
  Rat   300 NHDGDESIAGRT-TDAEFHTFFDERTFGLGEADCGL-----RPLFEKKSLTDKTE------KELL 352

  Fly   144 GFKITGAVNQ--EAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCV------HNKQP 200
            ...|.|.:.:  :||.|..||.:.:.|:.....|  ||.:||:...|||||||:      .|...
  Rat   353 DSYIDGRIVEGWDAEKGIAPWQVMLFRKSPQELL--CGASLISDRWVLTAAHCILYPPWDKNFTE 415

  Fly   201 SSIVVRAGEWDTQTQTEIRRHEDR--YVKEIIYHEQFN-KGSLYNDVAVMLLESPFTLQENIQTV 262
            :.::||.|:   .::|...|:.::  .:::|..|.::| :.:|..|:|::.|:.|....:.|..|
  Rat   416 NDLLVRIGK---HSRTRYERNVEKISMLEKIYIHPRYNWRENLDRDIALLKLKKPVPFSDYIHPV 477

  Fly   263 CLPNVGDKFDFD-------RCYATGWGKNK---FGKDGEYQ-VILKKVDMPVVPEQQCE--TNLR 314
            |||   ||....       :...||||..:   .....|.| .:|:.|::|:|....|:  |.:|
  Rat   478 CLP---DKQTVTSLLQAGYKGRVTGWGNLRETWTTNINEIQPSVLQVVNLPIVERPVCKASTRIR 539

  Fly   315 ETRLGRHFILHDSFICAG----GEKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVN 375
            .|         |:..|||    ..|..|.|:||.|.|.|.. :...:|:...|||:||.||....
  Rat   540 IT---------DNMFCAGFKVNDTKRGDACEGDSGGPFVMK-SPYNHRWYQMGIVSWGEGCDRNG 594

  Fly   376 IPGVYASVAKLRPWI 390
            ..|.|..|.:|:.|:
  Rat   595 KYGFYTHVFRLKRWM 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 78/266 (29%)
Tryp_SPc 153..390 CDD:214473 77/264 (29%)
F2NP_075213.2 GLA 25..89 CDD:214503
KR 107..189 CDD:214527
Kringle 215..292 CDD:278480
Thrombin_light 312..359 CDD:286482 14/57 (25%)
Tryp_SPc 359..608 CDD:214473 77/266 (29%)
Tryp_SPc 360..612 CDD:238113 78/268 (29%)
High affinity receptor-binding region which is also known as the TP508 peptide 547..569 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.