DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and CLIPB12

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_319994.4 Gene:CLIPB12 / 1280175 VectorBaseID:AGAP009217 Length:341 Species:Anopheles gambiae


Alignment Length:364 Identity:76/364 - (20%)
Similarity:134/364 - (36%) Gaps:82/364 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SSTQYQSCGDQKECVPRWLC-----------ANDTINTSGDGIIDIRLGTDAECKNYLDLCCDLP 117
            ::.|..:|...|.|:|...|           ...|:|.....:.:.....|...|  ..:||:.|
Mosquito    17 ATAQLNTCTGGKICIPIEQCPLFGSNSRATWTEATMNQFRARVCEREPTIDGWTK--YKVCCEPP 79

  Fly   118 NKRKDPIFEFKPDHP-------------EGCGYQNPNGVGFKITGAVNQEAEFGEFPWMLAILRE 169
                      .|..|             :|||....:.     ..:|......|:.||:..:...
Mosquito    80 ----------APSEPRDGRKPGLDLLDLKGCGMNRMHS-----NESVENNGTLGKLPWIALLKTS 129

  Fly   170 EGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRAGEWDTQTQTEIRRHEDRYVKEIIYHEQ 234
            .|.   |.|.|.||:...|||.|.|:.:|..:.:.:|..:.|.:....: :.:|..::..|.|:.
Mosquito   130 SGE---YHCAGTLISKRYVLTTAFCIISKNLAFVQLRKKDCDERGACTL-KPQDIPIERTIGHDS 190

  Fly   235 FNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFDFDRCYATGWGKNKFGKDGEYQVILKKV 299
            .||..|:|::.::.|....:...:::.:||| :|.:      |.|        .|.:|.::.:|.
Mosquito   191 SNKPWLFNNIGLVRLARDASFNSDVRPICLP-MGPE------YQT--------TDTKYFIVTRKE 240

  Fly   300 D-------------MPVVPEQQCETNLRETRLGRHFILHDSFICAGGEKDKDTCKGDGGSPLVCP 351
            |             :.:|..:.|::.|:.|       :|:|.:||......|.|....|:.|.. 
Mosquito   241 DYALLDTDAVAISEVHLVANEYCQSWLQRT-------VHNSQMCAIELAPNDDCAKPYGASLTA- 297

  Fly   352 IAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
             ..:..|....|..|:|:.....|...||..|.....||
Mosquito   298 -QARNGRHVMYGAHAFGMDICTQNESTVYTRVESFVDWI 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 57/251 (23%)
Tryp_SPc 153..390 CDD:214473 55/249 (22%)
CLIPB12XP_319994.4 Tryp_SPc 118..338 CDD:304450 57/246 (23%)
Tryp_SPc 118..335 CDD:214473 55/244 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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