DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and CLIPC2

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_313588.3 Gene:CLIPC2 / 1274460 VectorBaseID:AGAP004317 Length:383 Species:Anopheles gambiae


Alignment Length:331 Identity:95/331 - (28%)
Similarity:139/331 - (41%) Gaps:62/331 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LCCDL-----------PNKR-KD------------------PIFEFKPDHPEGCGYQNPNGVGFK 146
            :||.|           ||:| :|                  .:.:.||      ..|.|......
Mosquito    72 VCCPLDYRERLQQLNDPNQRCRDYQSASNSGLLFGSLAVGSSVVKLKP------RAQCPTDQNLI 130

  Fly   147 ITGAVNQEAEFGEFPWM--LAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRAGE 209
            :.|..   |.|||||.|  ||:..|.|.: ::.||..||:...|:|||||:.::   :||||.||
Mosquito   131 VGGTA---ARFGEFPHMARLAMPDENGAM-VFRCGATLISEQWVMTAAHCLESQ---TIVVRLGE 188

  Fly   210 WDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFDFD 274
            . .:...|.....|..|..|:.|..:...::|||:|::.|..|.|....|:..||.. ....|..
Mosquito   189 L-KEGNDEFGDPVDVQVTRIVKHPNYKPRTVYNDIALLKLARPVTFSMRIRPACLYG-SSTVDRT 251

  Fly   275 RCYATGWGKNK-FGKDGEYQVILKKVDMPVVPEQQCETNLRETR---LGRHFILHDSFICAGG-E 334
            :..|.|:|..: :|...:.   |.||.:.|.....|....:..|   .|    |.:|.:|||. .
Mosquito   252 KAVAIGFGSTEAYGAASKE---LLKVSLDVFTTAACSVFFQRNRRVPQG----LRESHLCAGFLS 309

  Fly   335 KDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWIDAKLKIWSI 399
            ..:|||.||.|.||......:....:..||.::|||||... ||:|..|::...||:.  .:|..
Mosquito   310 GGRDTCTGDSGGPLQISSEDEACVAQIIGITSFGIGCGSTT-PGIYTRVSEYIDWIEG--IVWPT 371

  Fly   400 DPRHYT 405
            |....|
Mosquito   372 DSASLT 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 79/244 (32%)
Tryp_SPc 153..390 CDD:214473 78/243 (32%)
CLIPC2XP_313588.3 Tryp_SPc 130..367 CDD:238113 81/255 (32%)
Tryp_SPc 130..364 CDD:214473 79/250 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
TreeFam 00.000 Not matched by this tool.
21.910

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