DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and LOC116412071

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_031761314.1 Gene:LOC116412071 / 116412071 -ID:- Length:272 Species:Xenopus tropicalis


Alignment Length:269 Identity:81/269 - (30%)
Similarity:125/269 - (46%) Gaps:34/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 CGYQNPNGVGFKITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQ 199
            ||......|..::..  .||.....:||.:::.........:.|||:|||||.|||||||:.:: 
 Frog    20 CGVPTYPPVESRVVN--GQEVAPHSWPWQVSLQYIYDGYWYHTCGGSLIAPNWVLTAAHCISSE- 81

  Fly   200 PSSIVVRAGEWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYN--DVAVMLLESPFTLQENIQTV 262
             ::..|:.|:.:.|...:  ..|...|..:..|.|:|..:|.|  |::::.||......:.|:..
 Frog    82 -NTYRVQLGKHNLQQFND--GQETIGVIGLFNHPQWNPNNLANGFDISLLKLEREVDYSDTIKPG 143

  Fly   263 CLPNVG----DKFDFDRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFI 323
            |||..|    ::|.   ||.||||  ....:|.....|::..:.:|....|.      ||...||
 Frog   144 CLPPAGYILPNQFG---CYVTGWG--YLQTEGPPSATLQQGLLKIVDYATCR------RLDWWFI 197

  Fly   324 -LHDSFICAGGEKDKDTCKGDGGSPLVCPIAGQKNR---FKSAGIVAWG--IGCGEVNIPGVYAS 382
             :..|.|||||:.:..:|.||.|.||.|     ||.   ::..|:|::|  .||.....|.|:..
 Frog   198 NVKTSMICAGGDGNVASCYGDSGGPLNC-----KNADGVWEVHGVVSFGSASGCNINKKPSVFTR 257

  Fly   383 VAKLRPWID 391
            |:....|||
 Frog   258 VSDYNSWID 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 76/249 (31%)
Tryp_SPc 153..390 CDD:214473 75/248 (30%)
LOC116412071XP_031761314.1 Tryp_SPc 32..268 CDD:238113 78/257 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.