DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and LOC116408674

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_031752209.1 Gene:LOC116408674 / 116408674 -ID:- Length:392 Species:Xenopus tropicalis


Alignment Length:239 Identity:67/239 - (28%)
Similarity:112/239 - (46%) Gaps:39/239 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 LNLYE--CGGALIAPNVVLTAAHCVHNKQPSSIVVRAGEWDTQT-QTEIRRH----EDRY----- 225
            :|.||  |.|.::....:.|||||..:..        ||.|.:: |..:..|    ::::     
 Frog     1 MNTYEHICTGTVLNNQWIFTAAHCFRHLN--------GENDIKSLQVVLGAHLLSEKEKHIQVLN 57

  Fly   226 VKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFD-FDRCYATGWGKNKFGKD 289
            ||:||.||.::....|.|:|::.|..|..|.:.:|..|||......: ...||..|||....|  
 Frog    58 VKQIIQHELYDPKVQYYDIALIQLNKPVQLNDYVQPACLPMSSATLEPLTECYLAGWGVRDEG-- 120

  Fly   290 GEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGGEKDKDTCKGDGGSPLVCPIAG 354
            .|...|:::|.:..:..::|    .:|.||   .:.:..:||..:.:..:|:||..:||:|    
 Frog   121 DEPVAIMQEVKVERINSKRC----NKTYLG---AIQEYHLCASQKANMKSCQGDSAAPLMC---- 174

  Fly   355 QKNR----FKSAGIVAWGIGCGEVNIPGVYASVAKLRPWIDAKL 394
             |.:    |...||.:||.||.::|.||:|.|......|:..|:
 Frog   175 -KRKTSTIFSVIGIASWGSGCSQINSPGIYTSTKDFVKWMVEKV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 66/234 (28%)
Tryp_SPc 153..390 CDD:214473 65/233 (28%)
LOC116408674XP_031752209.1 Tryp_SPc 2..212 CDD:238113 65/231 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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