DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and LOC108648789

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_031749506.1 Gene:LOC108648789 / 108648789 -ID:- Length:289 Species:Xenopus tropicalis


Alignment Length:251 Identity:89/251 - (35%)
Similarity:134/251 - (53%) Gaps:18/251 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KITGAVNQEAEFGEFPWMLAILREEGNLNLYE-CGGALIAPNVVLTAAHCVHNKQPSSIVVRAGE 209
            :|.|  .|||.:|::||. |.||..|   .|. |||.||....:||||.|:|:...||..|..|:
 Frog    35 RIMG--GQEAPYGKWPWQ-ANLRRPG---YYPYCGGTLIGEKWILTAAACIHSNTKSSFQVFVGD 93

  Fly   210 WDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKF-DF 273
            ::.....  :..:...||.||.|..:.:|.|.:::|::.|.:...:.:....||||:....| |.
 Frog    94 YNLDNTD--KGEQPVSVKRIIIHPSYREGYLNDNIALLELATKVQMNKVTLPVCLPDASVTFPDG 156

  Fly   274 DRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCET--NLRETRLGRHFI-LHDSFICAGGEK 335
            .:|..||||:...|.|.....:|::|::.::...:|.|  |:.:. .||... |.|:.:|||..|
 Frog   157 QKCSVTGWGQIMDGADPPSPRVLREVEVKMMSNDRCNTLFNIPDA-YGRTTANLTDTMLCAGYAK 220

  Fly   336 -DKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
             .:|:|.||.|.|||||..|   |:..||:|:.|.|||:.|.||:|..|:....||
 Frog   221 GGRDSCNGDVGGPLVCPKDG---RWYLAGVVSGGDGCGKPNRPGIYTRVSSYIKWI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 87/244 (36%)
Tryp_SPc 153..390 CDD:214473 85/242 (35%)
LOC108648789XP_031749506.1 Tryp_SPc 36..273 CDD:238113 87/248 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.