DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and Tpsab1

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_112464.4 Gene:Tpsab1 / 100503895 MGIID:96943 Length:273 Species:Mus musculus


Alignment Length:265 Identity:84/265 - (31%)
Similarity:126/265 - (47%) Gaps:38/265 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 QEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCV--HNKQPSSIVVRAGEWDTQTQ 215
            |||...::||.:: ||......::.|||:||.|..||||||||  ....|:.:.|       |.:
Mouse    33 QEAHGNKWPWQVS-LRANDTYWMHFCGGSLIHPQWVLTAAHCVGPDVADPNKVRV-------QLR 89

  Fly   216 TEIRRHEDRY--VKEIIYHEQF---NKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFDFDR 275
            .:...:.|..  |.:||.|..|   ..|:   |:|::.|.:|..:.:.:..|.||...:.|....
Mouse    90 KQYLYYHDHLMTVSQIITHPDFYIVQDGA---DIALLKLTNPVNISDYVHPVPLPPASETFPSGT 151

  Fly   276 -CYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRE---TRLGRHFILHDSFICAGGEKD 336
             |:.||||....|.:......||:|.:|::....|:....:   |....| |:.|..:|||.| .
Mouse   152 LCWVTGWGNIDNGVNLPPPFPLKEVQVPIIENHLCDLKYHKGLITGDNVH-IVRDDMLCAGNE-G 214

  Fly   337 KDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWIDAKLKIWSIDP 401
            .|:|:||.|.||||.:   ::.:..||:|:||.||.:.|.||:|..|.....||           
Mouse   215 HDSCQGDSGGPLVCKV---EDTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI----------- 265

  Fly   402 RHYTP 406
            .||.|
Mouse   266 HHYVP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 80/248 (32%)
Tryp_SPc 153..390 CDD:214473 79/247 (32%)
Tpsab1NP_112464.4 Tryp_SPc 29..266 CDD:238113 81/259 (31%)
Tryp_SPc 29..265 CDD:214473 79/247 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842851
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8716
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.