DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5390 and tmprss15

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_031752048.1 Gene:tmprss15 / 100490249 XenbaseID:XB-GENE-999987 Length:994 Species:Xenopus tropicalis


Alignment Length:442 Identity:104/442 - (23%)
Similarity:183/442 - (41%) Gaps:109/442 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ISDIFKTDETPKPSSPPPPVVNPKDSSG---------STGSENG---GSSSTQYQSCGDQKECVP 79
            :.|:|.|.....       |....||:|         :||...|   ..:||.:| || ..||:|
 Frog   579 VKDVFSTTSAMS-------VYFTSDSTGTAKGFLANYTTGLRLGMPEPCNSTSFQ-CG-SGECIP 634

  Fly    80 RWL-------CANDT--------INTSGDGIIDIRLGTD--AECKNYL------DLC--CDLPN- 118
            ...       |.:.|        .|:|..|::..::.::  ..|.::.      |:|  ..|.| 
 Frog   635 NTAVCDKHRDCDDGTDERHCVRLFNSSMSGLVQFKVQSEWHTACIDHWNEDISNDICHRLGLGNV 699

  Fly   119 ------------------KRKDPIFEFKPDHPEGCGYQN----------------PNGVGFKITG 149
                              :.:|......|.  :.|..|:                |...|.||.|
 Frog   700 NLTSAVLSEGNGPFVTLIQVEDGSLSLLPS--DQCANQSVIHIQCQQRECGKRLVPIKSGSKIVG 762

  Fly   150 AVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQ--PSSIVVRAGEWD- 211
              ..:|..|.:||::::...:..    .||.:|:....:::|||||:.:.  ||:...|.|... 
 Frog   763 --GSDAALGAWPWIVSLYYNDRQ----TCGASLVNQEWLVSAAHCVYGRNLIPSNWKARLGLHTN 821

  Fly   212 -TQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFDFD- 274
             ..||.:|   ..:.:.:|:.:.|:|:.:..:|:.:|.|:......:.||.:|||....:|... 
 Frog   822 LNLTQPQI---ATQMIDQIVINPQYNRRTKDSDIVMMHLQFKVNYSDYIQPICLPETDQEFSVGI 883

  Fly   275 RCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGGEKDK-D 338
            .|...|||:.:.|  |....||::.::|::...:|:..:.|      :.:.|:.:|.|.|:.. |
 Frog   884 NCSIAGWGRTQSG--GPVPNILQEAEIPLISNHKCQQQMPE------YNITDNMVCGGYEEGGID 940

  Fly   339 TCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWI 390
            ||:||.|.|::|.   |.|.:...|:.::|.||.:.:.||||..|.:...||
 Frog   941 TCQGDSGGPMMCQ---QNNEWFLVGVTSFGYGCAQPSRPGVYVRVTEFTNWI 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 67/244 (27%)
Tryp_SPc 153..390 CDD:214473 65/242 (27%)
tmprss15XP_031752048.1 SEA 36..>103 CDD:396113
LDLa 157..190 CDD:197566
CUB 199..305 CDD:238001
MAM 321..478 CDD:395504
CUB 501..608 CDD:395345 7/35 (20%)
LDLa 620..654 CDD:238060 10/35 (29%)
SR 655..746 CDD:214555 12/92 (13%)
Tryp_SPc 760..991 CDD:238113 69/250 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.