DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5390 and hgfac

DIOPT Version :9

Sequence 1:NP_001285802.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_002939269.3 Gene:hgfac / 100485696 XenbaseID:XB-GENE-940012 Length:595 Species:Xenopus tropicalis


Alignment Length:416 Identity:112/416 - (26%)
Similarity:173/416 - (41%) Gaps:109/416 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SSGSTGSENGGSSSTQY------QSC----------GDQKE------CVPRW---LCANDTINTS 91
            |||.|.....|....:|      |||          |.:||      |:| |   :...:.....
 Frog   210 SSGKTVCGCRGQYVGKYCNIDVTQSCYDSDNATEYRGIKKETQSGHSCLP-WNSDMLYEEIHTGQ 273

  Fly    92 GDGIIDIRLGTDAECK----NYLDLC------------CDLPNKR---------KDPIFEFKPDH 131
            |...|...||:...|:    :.:..|            |.:|..|         :|.:....|. 
 Frog   274 GMNFIPKGLGSHPYCRSPDDDEIPWCYLMNDRLVSWEHCSIPKCRDKGRRVIMQEDAVVPAPPK- 337

  Fly   132 PEGCGYQNPNGV---GFKITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAH 193
               ||.::...|   | :|.|  ...|..|..||:..|.  .||   |.|.|:||.|..|::|||
 Frog   338 ---CGKKHEKRVVARG-RILG--GNSALPGSHPWVAGIY--IGN---YFCAGSLIQPCWVVSAAH 391

  Fly   194 C-VHNKQPSSIVVRAGEWDTQTQTEIRR--HEDRYVKEIIYHEQFNKGSLY----NDVAVMLL-- 249
            | ..:...|.|.|..|:......|::.:  ..:||:       .::|.|::    :|:.::.|  
 Frog   392 CFADSPSKSKIRVVLGQHFFNQTTDVTQTFEVERYI-------FYDKYSVFKRNEHDIVLIKLKR 449

  Fly   250 -------ESPFTLQENIQTVCLPNVGDKF-DFDRCYATGWGKNKFGKDG-EYQVILKKVDMPVVP 305
                   ::.|     :||:|||:|...| |...|...|||  :..:|. ||...|::..:|:||
 Frog   450 INNACAKKTQF-----VQTICLPDVSAPFADDHHCQIAGWG--RMHEDSTEYAQNLQEAIVPLVP 507

  Fly   306 EQQCETNLRETRLGRHFILHDSFICAG-GEKDKDTCKGDGGSPLVCPIAGQKNRFKSA-GIVAWG 368
            :.:|.:   ....|..  :.::..||| .:...|:|:||.|.||.|    :|::.... |||:||
 Frog   508 DNKCSS---PEIYGAE--ISENMFCAGYFDCTIDSCQGDSGGPLAC----EKDKISYLWGIVSWG 563

  Fly   369 IGCGEVNIPGVYASVAKLRPWIDAKL 394
            .|||..|.||||..|:....||:.|:
 Frog   564 EGCGNHNKPGVYTKVSNYVDWINRKI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5390NP_001285802.1 Tryp_SPc 153..391 CDD:238113 78/257 (30%)
Tryp_SPc 153..390 CDD:214473 77/256 (30%)
hgfacXP_002939269.3 FN2 52..98 CDD:238019
EGF_CA 109..145 CDD:238011
FN1 147..185 CDD:238018
KR 235..319 CDD:294073 15/84 (18%)
Tryp_SPc 351..585 CDD:214473 79/263 (30%)
Tryp_SPc 352..588 CDD:238113 81/265 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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