DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYLD and cyldb

DIOPT Version :9

Sequence 1:NP_609371.2 Gene:CYLD / 34380 FlyBaseID:FBgn0032210 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_009304333.1 Gene:cyldb / 564158 ZFINID:ZDB-GENE-100208-1 Length:694 Species:Danio rerio


Alignment Length:649 Identity:248/649 - (38%)
Similarity:338/649 - (52%) Gaps:104/649 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EKEKKLTITNRFGDSLENYELSNE-SEHKTHVYPKKIPNRKNGILKNTDANHSAVDNQHLEDVDL 73
            :|:..|.:   .|..||..|..|| |..||...|                ..||.|...:...| 
Zfish   123 DKQGDLQV---LGFELELVETENEISLKKTAPLP----------------FFSAADILQVAPSD- 167

  Fly    74 ADILGTNWPKRAG-------PAAMILNNKSKTDPSNSVDLILKPASPILKIEPEEPLRFTIADYQ 131
               |.|..|.|..       .|..:||:....:..|:     |..|.:.|.:..|.:: .::.| 
Zfish   168 ---LNTRVPLRDAIDLGLKRKAVSLLNSLPSLNSRNA-----KKGSVLFKKDVSESIQ-ALSHY- 222

  Fly   132 PLIEIPGTELAIGSLVEV-SNPGVCEDLYGVVRWIGIPPGPQKNVLVGIEVEDESNLKNVVASDG 195
                    .|.:||:.|| |..|:  .:|||:||||:|.| :||...|:|::.|:    ...|||
Zfish   223 --------SLEVGSMAEVLSLNGL--TVYGVIRWIGVPEG-KKNCWAGLELDTEA----TTCSDG 272

  Fly   196 RHNGVRLFTCHDGRAIFVPANRCTADRRFADVD-------NSISANRVSSNHAKKFGVADCPAIY 253
            .....|.|||...:|:|||...|..|.||..:.       |..||..|..             :.
Zfish   273 TLGTKRYFTCEANKALFVPLTNCKPDSRFLLIPDEMLKPLNPPSATLVED-------------LD 324

  Fly   254 GSIPPLQIHNSDELASICGKFKGIQGHHNSCYLDATLFSMFTFTSVFDSILYRRPGPQDIRNYSE 318
            ..:||  :...|.|:.:.|:.||||||.|||||||||||:||.:..||.|..|....:     ..
Zfish   325 EDVPP--VAEQDVLSHLVGRMKGIQGHFNSCYLDATLFSLFTSSVAFDRIFNRSADSK-----KG 382

  Fly   319 VQKVLRDEIVNPLRKNVFVRSDRVMKLRELLDQLSSVSGLTCEEKDPEEFLNSLLSQIMRVEPFL 383
            :..:||.:|||.||::.||.::.|||.||.|...|..|    ||||||||:..||..::.:||.|
Zfish   383 ISHILRRDIVNCLRRSGFVPAENVMKFREQLGCKSFAS----EEKDPEEFITLLLQHVLHIEPLL 443

  Fly   384 KLSS----GQDSYFYQLFVEKDEKLTLPSVQQLFEQSFHSSDIKLKEVPSCFIIQMPRFGKNYKM 444
            |:.|    .|::|.:|:.|||::...:||||||.|.||.:|::|.:|:|||.|:|||||||.:||
Zfish   444 KIRSQGEFPQEAYTHQIIVEKNQVAAVPSVQQLLEMSFVTSNLKFEEIPSCLIVQMPRFGKKFKM 508

  Fly   445 YPRILPSQVLDVTDIIENSPRQCSLCGKLAEYECRDCF--GSLQAGSGLECTAFCPKCLKTFHSH 507
            :|:|:||..||:||::..|||:|.|||.||:|||..|.  ..||.|   :...:|..|....|:|
Zfish   509 FPKIIPSTELDITDVLHCSPRECFLCGHLAKYECVQCLMDRKLQPG---KIKQYCSTCNTQVHNH 570

  Fly   508 IKRTNHVSKKIYSPKEFKIMAEHMVVPRLYMELFAVVCIETSHYVAFVKSGSGPDAPWCFFDSMA 572
            ..|..|..:|:..|   ...||...|.|..|:||||:||.|||||:|||.|..|.: |.||||||
Zfish   571 PTRQEHTPQKLTLP---DCPAEDAPVQRHPMQLFAVLCINTSHYVSFVKYGPDPRS-WIFFDSMA 631

  Fly   573 DRKGEQN-GYNIPEITCVPELTQWLSEEGARSINETSTND-KVLPEHAKRIFCDAYMCLYQSTD 634
            ||.|:.| ||:||.|...||:..:||:    |..|.|:.| ....|..:|:..|:||||||:||
Zfish   632 DRCGDDNKGYSIPVIRSCPEVGDFLSQ----SEEEISSADLSQCSEAVRRLMVDSYMCLYQTTD 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYLDNP_609371.2 CAP_GLY 143..219 CDD:214997 31/76 (41%)
Peptidase_C19N 276..631 CDD:239135 169/362 (47%)
cyldbXP_009304333.1 CAP_GLY 226..296 CDD:214997 31/76 (41%)
Peptidase_C19 345..688 CDD:271592 169/362 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594440
Domainoid 1 1.000 53 1.000 Domainoid score I11370
eggNOG 1 0.900 - - E1_KOG3556
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48840
OrthoDB 1 1.010 - - D119442at2759
OrthoFinder 1 1.000 - - FOG0003008
OrthoInspector 1 1.000 - - otm25651
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11830
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3399
SonicParanoid 1 1.000 - - X3348
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.850

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