DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYLD and LOC100489307

DIOPT Version :9

Sequence 1:NP_609371.2 Gene:CYLD / 34380 FlyBaseID:FBgn0032210 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_002934368.2 Gene:LOC100489307 / 100489307 -ID:- Length:807 Species:Xenopus tropicalis


Alignment Length:623 Identity:236/623 - (37%)
Similarity:340/623 - (54%) Gaps:69/623 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SLENYELSNESEHKTHVYPKKIP--NRKNGILKNTDANHSAVDNQHLEDVDLADILGTNWPKRAG 86
            |:::...:.|...||.|..:..|  ......|..:...|....|.|:...|...:.....|    
 Frog   245 SVDHLPATEERNIKTRVPEEHSPADGEAPQPLTTSLEGHQIHSNFHVATEDSLQLPSLYCP---- 305

  Fly    87 PAAMILNNKSKTDPSNSVDLILKPASPILKIEPEEPLRFTIADYQPLIEIPGTELAIGSLVEVSN 151
                         |.|.:     |:||:.:.|.::                 .||.:.|:|||..
 Frog   306 -------------PKNGI-----PSSPLSETERKK-----------------VELELNSMVEVDE 335

  Fly   152 PGVCEDLYGVVRWIG-IPPGPQKNVLVGIEVEDESNLKNVVASDGRHNGVRLFTCHDGRAIFVPA 215
            |    .:|||:|||| ||...:.  :.|:|:|.|   .....:||.:.|.|.|.|...:|:||..
 Frog   336 P----PIYGVIRWIGQIPDSSEP--IAGLEMELE---MPSAGTDGIYRGNRYFNCGPNKALFVKL 391

  Fly   216 NRCTADRRFADVDNSISANRVSSNHAKKFGVADCPAIYGSIPPLQIHNSDELASICGKFKGIQGH 280
            ..|..|.||..:..|.:..:..::.|.|...::|  |..:.||  :..::.:..:.|..||||||
 Frog   392 RNCRPDSRFYSIYGSTNQIQRCNSIAFKDYTSEC--IEENTPP--VTGTEAIERLIGWKKGIQGH 452

  Fly   281 HNSCYLDATLFSMFTFTSVFDSILYRRPGPQDIRNYSEVQKVLRDEIVNPLRKNVFVRSDRVMKL 345
            .||||||||||.||..:||.|::|.|.|...|..:|:|.:.:||.|||||||||.:|.:.:||.|
 Frog   453 CNSCYLDATLFCMFACSSVLDTMLLRPPDKNDGDSYTETRDLLRIEIVNPLRKNGYVCATKVMAL 517

  Fly   346 RELLDQLSSVSGLTCEEKDPEEFLNSLLSQIMRVEPFLKL----SSGQDSYFYQLFVEKDEKLTL 406
            |::|:.....:|.|.||||||||||.|. |:::|||...:    ...|...|||:|:||.:.:.:
 Frog   518 RKILEAAGKSTGFTSEEKDPEEFLNQLF-QVLKVEPLFYIRTCKKKPQGCIFYQIFMEKRQSVNI 581

  Fly   407 PSVQQLFEQSFHSSDIKLKEVPSCFIIQMPRFGKNYKMYPRILPSQVLDVTDIIENSPRQCSLCG 471
            ||||||.|.|..:||:|..|.|||.||||||.|||:||:|.|:|:..||:||::|::|||||:|.
 Frog   582 PSVQQLLEWSMVTSDLKFTEAPSCLIIQMPRNGKNFKMFPTIIPTLELDITDLLEDTPRQCSICQ 646

  Fly   472 KLAEYECRDCFGSLQAGSGLECTAFCPKCLKTFHSHIKRTNHVSKKIYSPKEFKIMAEHMVVPRL 536
            .||..||::|:.......| ....:|..|.|..|.|.:|..|..:.:..|::   ::|..|:.|.
 Frog   647 SLAVVECQECYEDTGISPG-HIKQYCELCSKQVHLHRRRIGHRPRGLSVPRD---LSEQAVLHRQ 707

  Fly   537 YMELFAVVCIETSHYVAFVKSGSGPDAPWCFFDSMADRKGEQNGYNIPEITCVPELTQWLSEEGA 601
            .|:|:||:||||||||||::........|.||||||||:|.:||:|||.:|..||||::|.    
 Frog   708 CMQLYAVLCIETSHYVAFIRHSFHHSTQWAFFDSMADREGGENGFNIPRVTPCPELTEYLK---- 768

  Fly   602 RSINETSTND-KVLPEHAKRIFCDAYMCLYQSTDIMMY 638
            .:..|....| |.:|.:|:|:.||||||||.|.|:.:|
 Frog   769 MTPEELQQEDPKTMPTYARRLLCDAYMCLYYSPDLSLY 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYLDNP_609371.2 CAP_GLY 143..219 CDD:214997 27/76 (36%)
Peptidase_C19N 276..631 CDD:239135 172/359 (48%)
LOC100489307XP_002934368.2 CAP_GLY 112..184 CDD:214997
NIP100 125..>263 CDD:227569 5/17 (29%)
CAP_GLY 327..395 CDD:214997 27/76 (36%)
Peptidase_C19N 448..798 CDD:239135 171/358 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11721
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119442at2759
OrthoFinder 1 1.000 - - FOG0003008
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11830
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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