Protein Alignment Hand and neurod6

DIOPT Version :10

• Sequence 1: NP_609370.2
• Gene: Hand / 34379
• FlyBaseID: FBgn0032209
• Length: 174
• Species: Drosophila melanogaster
• Sequence 2: NP_001072273.1
• Gene: neurod6 / 779726
• XenbaseID: XB-GENE-969227
• Length: 337
• Species: Xenopus tropicalis
• Alignment Length: 172
• Identity: 42/172 - (24%)
• Similarity: 64/172 - (37%)
• Gaps: 48/172 - (27%)

  Fly    29 MKHSESQVQQQIYNTSHLGYVPTSNT----------------------------------RIVKK 59
            :|..||..:|.:.:..|:...|...|                                  ||..:
 Frog    31 VKKLESCAKQLVSHGKHIKRSPEEETEQEEEDEDREEEDENGLPRRRGPRKKKMTKVRIERIKVR 95

  Fly    60 RNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGDLDPKGGF 124
            |..||.:||.|...:|:|...||:.:|......|||||:||:||..||..|..:|      :.|.
 Frog    96 RVEANARERGRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL------RIGK 154

  Fly   125 RAELKPVSRKICSEKKH--------CLKSEIQNVPLSTKGRT 158
            |.:|....:.:|.....        ||:...::..:|..|.|
 Frog   155 RPDLLTFVQSLCKGLSQPTTNLVAGCLQLNARSFLMSQSGDT 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hand	NP_609370.2	bHLH_TS_HAND	59..114	CDD:381472	23/54 (43%)
neurod6	NP_001072273.1	bHLH_TS_NeuroD4_ATOH3	74..151	CDD:381564	26/82 (32%)
		Neuro_bHLH	153..272	CDD:463621	9/44 (20%)