DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and mespaa

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571626.1 Gene:mespaa / 58069 ZFINID:ZDB-GENE-000406-8 Length:223 Species:Danio rerio


Alignment Length:198 Identity:43/198 - (21%)
Similarity:75/198 - (37%) Gaps:59/198 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TCEYSTMYYNSIYNTSNMFDMKHSESQVQQQIYNTSHLGYVPTSNTRIVK------KRNTANKKE 67
            :|.:|...|:.:   ..:|.....::.||            |...|...|      ||.||:::|
Zfish    47 SCSFSPPAYSLL---PQIFPKSIQKTDVQ------------PPKRTGRPKSKFPGVKRQTASERE 96

  Fly    68 RRRTQSINNAFSYLREKIPN--VPTDTKLSKIKTLKLAILYINYLVNVLDGDLD----------- 119
            :.|.:.:..|..:||..:|.  .|....|:||:||:|||.||:.|.:.|....|           
Zfish    97 KLRMRDLTKALHHLRTFLPASVAPVGKTLTKIETLRLAIQYISCLSDQLGCGEDVEICEAQDEVI 161

  Fly   120 ----------PKGGFRAELKPVSRKI---CSEKKHCLKSEIQNVPLSTKGRTGWPQDVWASELIP 171
                      ......::..|..:.:   |.:.::.::.:..:.|         .||||.|:   
Zfish   162 STSASVFDNFSSASSASQSLPAQQFMSMSCYQTQNPVQGDFHSFP---------AQDVWFSQ--- 214

  Fly   172 EHN 174
            .||
Zfish   215 RHN 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 22/56 (39%)
mespaaNP_571626.1 bHLH_SF 88..152 CDD:469605 24/63 (38%)

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