DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and scxb

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_021328670.1 Gene:scxb / 567817 ZFINID:ZDB-GENE-090806-1 Length:200 Species:Danio rerio


Alignment Length:144 Identity:51/144 - (35%)
Similarity:69/144 - (47%) Gaps:45/144 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 HSE--------SQVQQQIYNTSHLGY------------------VPTS-NTRI--VKKRNTANKK 66
            |||        |..:.:.:.||..||                  :||. .|.|  |::|||||.:
Zfish    21 HSEDDDNGSEGSGSEDKSFRTSSHGYGSFKLGVRKKRYSCRPLAIPTELCTPITEVRQRNTANAR 85

  Fly    67 ERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGDLDPKGGFRAELKPV 131
            ||.||.|:|.||:.||..||..|.|.|||||:||:||..||::|.|||                :
Zfish    86 ERERTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL----------------L 134

  Fly   132 SRKICSEKKHCLKS 145
            ..:.|.:.:.||:|
Zfish   135 VGEECGDGQPCLRS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 32/54 (59%)
scxbXP_021328670.1 bHLH_SF 75..142 CDD:469605 36/82 (44%)

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