DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and Msgn1

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_062417.1 Gene:Msgn1 / 56184 MGIID:1860483 Length:188 Species:Mus musculus


Alignment Length:123 Identity:32/123 - (26%)
Similarity:63/123 - (51%) Gaps:13/123 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSVALTCEYS------TMYYNSIYNTSNMFDMKHSESQVQQQIYNTSHLGYVPTSNTRI---VKK 59
            :.|||.|.:|      :..|.| :..:.:.::.:|....|....:|:. |......:::   |::
Mouse    57 SEVALPCGHSGASTGGSDGYGS-HEAAGLVELDYSMLAFQPPYLHTAG-GLKGQKGSKVKMSVQR 119

  Fly    60 RNTANKKERRRTQSINNAFSYLREKIPNVPTD--TKLSKIKTLKLAILYINYLVNVLD 115
            |..|:::|:.|.:::.:|...||..:|.|.:.  ..|:||:|||..|.||..|.::|:
Mouse   120 RRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLN 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 19/56 (34%)
Msgn1NP_062417.1 bHLH_TS_Msgn1 112..177 CDD:381509 20/64 (31%)

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