DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and olig3

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001008191.1 Gene:olig3 / 493553 XenbaseID:XB-GENE-919789 Length:263 Species:Xenopus tropicalis


Alignment Length:109 Identity:35/109 - (32%)
Similarity:51/109 - (46%) Gaps:15/109 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NSIYNTSNMFDMKHSESQVQQQIYNTSHLGYVPTSNTRIVKK---------RNTANKKERRRTQS 73
            :|:.:|.|....|.||..:.:.    ...|...:|..:|.|:         |...|.:||:|...
 Frog    33 SSVSSTQNDMLQKMSEEMLSKH----GSRGEGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHD 93

  Fly    74 INNAFSYLREKIP--NVPTDTKLSKIKTLKLAILYINYLVNVLD 115
            :|.|...|||.:|  :.|:..|||||.||.||..||..|.:.|:
 Frog    94 LNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLE 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 24/65 (37%)
olig3NP_001008191.1 bHLH_SF 64..144 CDD:469605 27/74 (36%)

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