DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hand and net

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster


Alignment Length:149 Identity:40/149 - (26%)
Similarity:66/149 - (44%) Gaps:25/149 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NTSNMFDMKHSESQVQQQIYNTSHLGYV--PTSNTRIVK-----KRNTANKKERRRTQSINNAFS 79
            :||:.|    .|:.:..:..|.:.|..:  |..:.|..|     :|..||.:||.|..:|:.|:.
  Fly   229 STSSSF----LEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYE 289

  Fly    80 YLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGDLDPKGGFRAELKPVSRKICSEKKHCLK 144
            .||:.:|...:..||||:..|::|..||..|..:...|      :.|:....|...|.|   .:.
  Fly   290 TLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGED------YSADQSVPSIATCLE---AVT 345

  Fly   145 SEIQNVPLSTKGRTGWPQD 163
            |.||     |:|:....:|
  Fly   346 STIQ-----TEGKVKRKKD 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 20/54 (37%)
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 22/72 (31%)

Return to query results.
Submit another query.