DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hand and Fer2

DIOPT Version :9

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster


Alignment Length:112 Identity:41/112 - (36%)
Similarity:53/112 - (47%) Gaps:31/112 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KRNTANKKERRRTQ----------SINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNV 113
            :|..||.:||:|.|          |||:||..||..:|..|.:.:||||.||:|||.||:.|..|
  Fly   148 QRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREV 212

  Fly   114 LDGDLDPKGGFRAELKPVSRKICSEKKHCLKSEIQNVPLSTKGRTGW 160
            |..|.||       |..|.:        ||:.||:      ..|..|
  Fly   213 LQTDYDP-------LTYVEK--------CLRGEIK------ADRANW 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 HLH 59..110 CDD:278439 27/60 (45%)
Fer2NP_001287359.1 HLH 148..210 CDD:278439 27/61 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452834
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23349
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.