DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hand and tal2

DIOPT Version :9

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_958496.3 Gene:tal2 / 394239 ZFINID:ZDB-GENE-040115-1 Length:109 Species:Danio rerio


Alignment Length:109 Identity:36/109 - (33%)
Similarity:54/109 - (49%) Gaps:21/109 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGD-LDPKGGFRAE 127
            |.:||.|..::|.||:.||:.||..|.:.||||.:.|:||:.|||:||.:|:.. .:|....:|.
Zfish     8 NTRERWRQHNVNTAFAELRKLIPTHPPEKKLSKNEILRLAMRYINFLVTLLESQGGEPSAHSQAA 72

  Fly   128 LKPVSRKICSEKKHCLKSEIQNVPLSTKGRTGWPQDVWASELIP 171
            |..:           |...:||:      ||   ...|.|:..|
Zfish    73 LLTL-----------LTGNMQNL------RT---DRTWTSDTDP 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 HLH 59..110 CDD:278439 22/45 (49%)
tal2NP_958496.3 HLH 8..60 CDD:197674 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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