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Protein Alignment Hand and twi
DIOPT Version :9
Sequence 1: | NP_609370.2 |
Gene: | Hand / 34379 |
FlyBaseID: | FBgn0032209 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Alignment Length: | 146 |
Identity: | 46/146 - (31%) |
Similarity: | 69/146 - (47%) |
Gaps: | 43/146 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 SNTRIVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDG 116
||.|:: ||.:||:||||:|:||..|::.||.:|:| |||||:|||||..||::|..:|..
Fly 361 SNQRVM-----ANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSS 419
Fly 117 D-------LDPKG-----------------GFRAELKPVSRKICSEKKHCLKSEIQNVPLSTKGR 157
. |:.:| |..|:|| ||: :....|:....:
Fly 420 SDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLK------------CLR-KANGAPIIPPEK 471
Fly 158 TGWPQDVWASELIPEH 173
..:...||..|...:|
Fly 472 LSYLFGVWRMEGDAQH 487
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Hand | NP_609370.2 |
HLH |
59..110 |
CDD:278439 |
28/50 (56%) |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
29/55 (53%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45452837 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR23349 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R5507 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.970 |
|
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