DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and cato

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster


Alignment Length:71 Identity:30/71 - (42%)
Similarity:43/71 - (60%) Gaps:4/71 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PTSNTRIVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVL 114
            ||...|   :|..||.:||:|...:|.||..|||.:|....|.||||.:||::|..||..|.::|
  Fly    98 PTVQKR---RRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLL 159

  Fly   115 -DGDLD 119
             :||::
  Fly   160 NNGDVE 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 24/54 (44%)
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 24/54 (44%)

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