DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and Bhlha9

DIOPT Version :9

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_038943763.1 Gene:Bhlha9 / 363656 RGDID:1311234 Length:230 Species:Rattus norvegicus


Alignment Length:170 Identity:40/170 - (23%)
Similarity:61/170 - (35%) Gaps:54/170 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGDLDPK-- 121
            :|..||.:||:|....|.||:.||..:.:.....:||||.||:.||..|..|..||.....|:  
  Rat    61 RRMAANVRERKRILDYNEAFNALRRALQHDLGGKRLSKIATLRRAIHRITALSLVLRASPAPRWP 125

  Fly   122 ------------------GGF---RAELKPVSRKI------------------CSEKKHC----L 143
                              .||   |:.|.|.:..:                  ||...|.    :
  Rat   126 CGHLECHGQAAHGSSAGDSGFSVPRSVLSPAAPSLARRDTASPLVPPAPRCASCSPNAHLGRPRM 190

  Fly   144 KSEIQNVPLSTKGR---------TGWPQDVWASELIPEHN 174
            .:|:.::..::.|.         .|..|..|.|.|..:|:
  Rat   191 MAEVPSLAQASGGSWRRCPGAAPVGSIQWRWGSGLGYQHS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 HLH 59..110 CDD:278439 20/50 (40%)
Bhlha9XP_038943763.1 bHLH_TS_bHLHa9 54..116 CDD:381482 21/54 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343513
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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