DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hand and tx

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_061501505.1 Gene:tx / 3290921 VectorBaseID:AGAMI1_010116 Length:444 Species:Anopheles gambiae


Alignment Length:206 Identity:45/206 - (21%)
Similarity:71/206 - (34%) Gaps:91/206 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DMKHS--ESQVQQQIYNTSHLGYVPTSNTRIVK-------------------KRNTANKKERRRT 71
            |.|:|  :.|.::....|:.:....|..|...|                   :|.|||.:||.|.
Mosquito    56 DEKYSLRQRQSRRTTLETATISKTTTKTTTTTKEKAAPKEKPKPKAAPLSKYRRKTANARERSRM 120

  Fly    72 QSINNAFSYLREKIP--------------------NVPTDTKLSKIKTLKLAILYINYLVNVLDG 116
            :.||:||..||..:|                    :..:..||:||.||:||:.||..|.:::.|
Mosquito   121 REINSAFENLRRAVPVAVAGTSGTSSPVSSPQCSGSAASSEKLTKITTLRLAMKYIRILSDMIHG 185

  Fly   117 ---------DLDP------------------KGGFR--------------------AELKPVSRK 134
                     :||.                  :||::                    .:.||:|  
Mosquito   186 TPGTLENNNELDMVNHNEIEREVMQKGLLLLEGGYQMGGPGGYVSSSPAVSPARPAVDAKPLS-- 248

  Fly   135 ICSEKKHCLKS 145
             .|.|.|..:|
Mosquito   249 -ASSKNHSQQS 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 25/74 (34%)
txXP_061501505.1 None

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