Protein Alignment Hand and Msc

DIOPT Version :9

• Sequence 1: NP_609370.2
• Gene: Hand / 34379
• FlyBaseID: FBgn0032209
• Length: 174
• Species: Drosophila melanogaster
• Sequence 2: XP_008761698.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 89
• Identity: 35/89 - (39%)
• Similarity: 49/89 - (55%)
• Gaps: 15/89 - (16%)

  Fly    59 KRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGD------ 117
            :||.||.:||.|.:.::.|||.|:..:|.||.||||||:.||:||..||.:|..:|..|
  Rat   105 QRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSY 169

  Fly   118 ---------LDPKGGFRAELKPVS 132
                     |..:.|.|..|:||:
  Rat   170 VHPVNLVGMLRVRPGDRRFLEPVT 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hand	NP_609370.2	HLH	59..110	CDD:278439	26/50 (52%)
Msc	XP_008761698.1	bHLH_TS_musculin	102..167	CDD:381546	29/61 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343495
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.740