DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and ascl1b

DIOPT Version :9

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571306.1 Gene:ascl1b / 30478 ZFINID:ZDB-GENE-980526-174 Length:195 Species:Danio rerio


Alignment Length:71 Identity:27/71 - (38%)
Similarity:42/71 - (59%) Gaps:4/71 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LGY-VPTSNTRIVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINY 109
            ||| :|......|.:|   |::||.|.:.:|..|..||:.:||...:.|:||::||:.|:.||..
Zfish    56 LGYTIPQQQPMAVARR---NERERNRVKQVNMGFQTLRQHVPNGAANKKMSKVETLRSAVEYIRA 117

  Fly   110 LVNVLD 115
            |..:||
Zfish   118 LQQLLD 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 HLH 59..110 CDD:278439 19/50 (38%)
ascl1bNP_571306.1 HLH 79..124 CDD:197674 17/45 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..164
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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