DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and ascl1a

DIOPT Version :9

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571294.1 Gene:ascl1a / 30466 ZFINID:ZDB-GENE-980526-90 Length:196 Species:Danio rerio


Alignment Length:106 Identity:33/106 - (31%)
Similarity:54/106 - (50%) Gaps:16/106 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TSNMFDMKHSESQVQQQIYNTSHL------------GY-VPTSNTRIVKKRNTANKKERRRTQSI 74
            |.:....|.:..|.::|..::..|            || :|......|.:|   |::||.|.:.:
Zfish    33 TDSQCSNKSASKQAKRQRSSSPELLRCKRRLNFAGFGYSLPQQQPHAVARR---NERERNRVKLV 94

  Fly    75 NNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLD 115
            ||.|:.|||.:||...:.|:||::||:.|:.||..|..:||
Zfish    95 NNGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLD 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 HLH 59..110 CDD:278439 21/50 (42%)
ascl1aNP_571294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..54 4/20 (20%)
HLH 94..136 CDD:197674 19/42 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..186
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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