DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and atoh1a

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571166.2 Gene:atoh1a / 30303 ZFINID:ZDB-GENE-990415-17 Length:292 Species:Danio rerio


Alignment Length:96 Identity:37/96 - (38%)
Similarity:50/96 - (52%) Gaps:23/96 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PTS-NTRIVKK--RNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYL- 110
            |:| :|.:|:|  |..||.:||||...:|:||..||..||....|.||||.:||::|.:|||.| 
Zfish   107 PSSKSTNVVQKQRRMAANARERRRMHGLNHAFDELRSVIPAFDNDKKLSKYETLQMAQIYINALS 171

  Fly   111 -------------------VNVLDGDLDPKG 122
                               .|||:.|..|:|
Zfish   172 DLLQGPGAKADPPNCDLLHANVLETDRSPRG 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 28/76 (37%)
atoh1aNP_571166.2 bHLH_TS_ATOH1 114..177 CDD:381556 28/62 (45%)

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