DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hand and twist3

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571060.2 Gene:twist3 / 30176 ZFINID:ZDB-GENE-000210-7 Length:199 Species:Danio rerio


Alignment Length:112 Identity:44/112 - (39%)
Similarity:65/112 - (58%) Gaps:10/112 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SIYNTSNMFDMKHSESQVQQQIYNTSHLGYVPTSNTRIV--------KKRNTANKKERRRTQSIN 75
            |:.|.||:...:...|.......::|.|..|.:|.:.:.        .:|..||.:||:||||:|
Zfish    58 SLDNPSNLAPKRPKRSSPSSSSSSSSSLVPVVSSVSPVPGQPFEDLHTQRVIANVRERQRTQSLN 122

  Fly    76 NAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGD-LDPK 121
            :||:.||:.||.:|:| |||||:.||||..||::|..||..| :|.|
Zfish   123 DAFASLRKIIPTLPSD-KLSKIQILKLASRYIDFLYQVLQSDEMDAK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 30/54 (56%)
twist3NP_571060.2 bHLH_SF 98..171 CDD:469605 35/72 (49%)

Return to query results.
Submit another query.