DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and Mesp2

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001099743.1 Gene:Mesp2 / 293046 RGDID:1305959 Length:368 Species:Rattus norvegicus


Alignment Length:58 Identity:21/58 - (36%)
Similarity:36/58 - (62%) Gaps:2/58 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KRNTANKKERRRTQSINNAFSYLREKIPN--VPTDTKLSKIKTLKLAILYINYLVNVL 114
            :|.:|:::|:.|.:::..|...||..:|.  .|....|:||:||:|||.||.:|..:|
  Rat    82 QRQSASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSALL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 20/56 (36%)
Mesp2NP_001099743.1 bHLH_TS_Mesp 82..146 CDD:381508 21/58 (36%)

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