DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and hlh-10

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_505401.2 Gene:hlh-10 / 191402 WormBaseID:WBGene00001954 Length:202 Species:Caenorhabditis elegans


Alignment Length:116 Identity:34/116 - (29%)
Similarity:58/116 - (50%) Gaps:20/116 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MKHSESQVQQQIYNTSHLGYVPTSNTR---------------IVKKRNTANKKERRRTQSINNAF 78
            :|.::|:|..:..:|..    ||.|:|               :..:|..||.:||.|.|.::..|
 Worm    81 VKQNKSEVNDENESTPS----PTQNSRRRTSTGKIDRRMVGKMCTRRYEANARERNRVQQLSKMF 141

  Fly    79 SYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGDLDPKGGFRAELK 129
            ..||..:| :..|.|:||:.|||:|..||.||..:|..:.:.:..|:.:|:
 Worm   142 DQLRVCLP-IEDDAKISKLATLKVASSYIGYLGAILQENSNDEEEFKKQLQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 23/54 (43%)
hlh-10NP_505401.2 bHLH_SF 121..179 CDD:469605 24/58 (41%)

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