DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and hnd-1

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_509952.1 Gene:hnd-1 / 183457 WormBaseID:WBGene00001981 Length:226 Species:Caenorhabditis elegans


Alignment Length:61 Identity:25/61 - (40%)
Similarity:42/61 - (68%) Gaps:2/61 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KRNTANKKERRRTQSINNAFSYLREKIPNVPTDTK--LSKIKTLKLAILYINYLVNVLDGD 117
            ::..:.:||.||.|.||:||..|::.||.:.::.:  |.|||||:||:.||::|..:|.|:
 Worm    24 RKEKSREKEHRRAQCINSAFEILQQHIPYLKSEERKSLPKIKTLRLAMQYIDHLKKLLGGN 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 23/56 (41%)
hnd-1NP_509952.1 bHLH_TS_ASCL 24..81 CDD:381424 23/56 (41%)

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