DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and hlh-12

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_501445.1 Gene:hlh-12 / 182980 WormBaseID:WBGene00001956 Length:150 Species:Caenorhabditis elegans


Alignment Length:73 Identity:23/73 - (31%)
Similarity:40/73 - (54%) Gaps:8/73 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RIVK----KRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYI----NYLV 111
            |:.|    :|:.||::||:|...:|..|..|...:|.....|:||:::.|:.|..||    |:|:
 Worm     6 RVTKLNTDRRSRANERERQRVSEMNGMFDVLLNLLPPSHFKTRLSRVQILREATSYIIRLHNFLI 70

  Fly   112 NVLDGDLD 119
            ...:.|:|
 Worm    71 ESSNSDID 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 19/58 (33%)
hlh-12NP_501445.1 HLH 14..66 CDD:459628 17/51 (33%)

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