DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and Msc

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001398640.1 Gene:Msc / 17681 MGIID:1333884 Length:238 Species:Mus musculus


Alignment Length:59 Identity:29/59 - (49%)
Similarity:40/59 - (67%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVLDGD 117
            :||.||.:||.|.:.::.|||.|:..:|.||.||||||:.||:||..||.:|..:|..|
Mouse   103 QRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQED 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 27/54 (50%)
MscNP_001398640.1 bHLH_TS_musculin 100..165 CDD:381546 29/59 (49%)

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