DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand and neurod2

DIOPT Version :10

Sequence 1:NP_609370.2 Gene:Hand / 34379 FlyBaseID:FBgn0032209 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_068080586.1 Gene:neurod2 / 114435 ZFINID:ZDB-GENE-010608-3 Length:373 Species:Danio rerio


Alignment Length:87 Identity:29/87 - (33%)
Similarity:43/87 - (49%) Gaps:6/87 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PTSNTRIVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTLKLAILYINYLVNVL 114
            |....|...:|..||.:||.|...:|:|...||:.:|......|||||:||:||..||..|..:|
Zfish   109 PARLERSKVRRQKANARERTRMHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 173

  Fly   115 DGDLDPKGGFRAELKPVSRKIC 136
                  :.|.|.::....:.:|
Zfish   174 ------RNGKRPDVVSYVQTLC 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HandNP_609370.2 bHLH_TS_HAND 59..114 CDD:381472 23/54 (43%)
neurod2XP_068080586.1 bHLH_TS_NeuroD2 92..176 CDD:381563 26/72 (36%)
Neuro_bHLH 176..295 CDD:463621 3/14 (21%)

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